usage: python -m tcr_pmhc_interface_analysis.apps.renumber_structure
[-h] [--output OUTPUT] [--log-level {debug,info,warning,error}]
structure
Renumber TCR structure following either IMGT or Aho numbering.
Requirements:
- ANARCI: https://github.com/oxpig/ANARCI
positional arguments:
structure path to the pdb structure file
options:
-h, --help show this help message and exit
--output OUTPUT, -o OUTPUT
name of output structure file
Logging:
Options for logging
--log-level {debug,info,warning,error}
Level to log messages at (Default: 'warning')